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Ethoscopy

Ethoscopy user manual

Getting started

Installing ethoscopy as a docker container with ethoscope-lab (recommended). The ethoscope-lab d...

Metadata design

What is the metadata? The metadata is a simple .csv file that contains the information to (1) fi...

Loading the data

Setting up To begin you need three paths saved as variables: the path to the metadata .csv fi...

Behavpy

Behavpy - Circadian analysis

At the Gilestro lab we work on sleep and often need to do a lot of circadian analysis to complime...

Behavpy - Hidden Markov Model

Behavpy_HMM is an extension of behavpy that revolves around the use of Hidden Markov Models (HMM)...

Jupyter tutorials

Ethoscopy is best used in a Jupyter instance. We provide a pre-baked docker container that comes ...